Real-time Plasmid Transmission Detection Pipeline
Natalie Scherff, Jörg Rothgänger, Thomas Weniger, Alexander Mellmann, Dag Harmsen
The paper evaluates a real-time plasmid transmission detection pipeline integrated into SeqSphere+ software, showing it can detect plasmid clusters and early warning alerts effectively using long-read sequencing data.
Microbiology Spectrum · Oct 29, 2024Peer-reviewedBioinformatics