Author

U. Bastolla

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:Arabidopsis· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Assay:DNA methylation· 1

Frequent Co-Authors

A. Pascual-Garcia· 1 shared C. Costas· 1 shared C. Gutierrez· 1 shared C. Pedros-Alio· 1 shared F. Puente-Sanchez· 1 shared I. Araguez· 1 shared I. Lorca-Alonso· 1 shared J. Casacuberta· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperMicrobiology

A. Pascual-Garcia

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Author profile →

3 papers

Recent·Most cited

Site-specific structure and stability constrained substitution models improve phylogenetic inference

I. Lorca-Alonso, M. Arenas, U. Bastolla

This paper introduces structure and stability constrained substitution models (SSCPE) that improve phylogenetic inference by incorporating structural and folding stability constraints, leading to more accurate tree reconstructions.

bioRxiv · Jan 22, 2023Evolutionary Biology

Cross-biome microbial networks reveal functional redundancy and suggest genome reduction through functional complementarity

F. Puente-Sanchez, A. Pascual-Garcia, U. Bastolla, C. Pedros-Alio, J. Tamames

This study identifies general assembly principles of microbial communities by analyzing cross-biome data, revealing functional redundancy and links between genome reduction and cooperation.

bioRxiv · Sep 11, 2022Microbiology

Differences in firing efficiency, chromatin and transcription underlie the developmental plasticity of Arabidopsis originome

J. Sequeira-Mendes, Z. Vergara, R. Peiro, J. Morata, I. Araguez, C. Costas, R. Mendez-Giraldez, J. Casacuberta, U. Bastolla, C. Gutierrez

The paper examines the originome and chromatin landscape of Arabidopsis thaliana at two developmental stages, revealing how ORI firing efficiency and chromatin features change with development.

bioRxiv · Jul 6, 2018Plant Biology