Author

Veli Mäkinen

Primary ORCID profile (0000-0003-4454-1493 · 8 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Veli MäkineniD8 papers · University of Helsinki

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Approach:deep learning· 1 Organism:human· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Ahmed Sobih· 1 shared Alexandru I. Tomescu· 1 shared Anna Kuosmanen· 1 shared

Activity by Year

2016-2016 · peak 2/yr

Co-Author Collaboration Network

3 top collaborators · 1 mutual co-author link

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1 shared paperBioinformatics

Ahmed Sobih

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 27, 2016

Evaluating approaches to find exon chains corresponding to long reads

Anna Kuosmanen, Veli Mäkinen

The paper evaluates methods for finding exon chains from long reads and shows that combining with short reads improves accuracy.

DOI 10.1101/066241

long-read sequencingstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 29, 2016

MetaFlow: Metagenomic profiling based on whole-genome coverage analysis with min-cost flows

Ahmed Sobih, Alexandru I. Tomescu, Veli Mäkinen

MetaFlow improves metagenomic profiling by analyzing whole-genome coverage using min-cost flows, outperforming existing tools in accuracy and sensitivity.

DOI 10.1101/038208

humanmetagenomics

𝕏 PostBluesky