Svirlpool: structural variant detection from long read sequencing by local assembly
Vinzenz May, Till Hartmann, Dieter Beule, Manuel Holtgrewe
Svirlpool detects structural variants from ONT data using local consensus assemblies, achieving high Mendelian consistency and outperforming existing methods in certain metrics.
bioRxiv · Nov 3, 2025 · PreprintBioinformatics