RATTLE: Reference-free reconstruction and quantification of transcriptomes from Nanopore sequencing
Ivan de la Rubia, Akanksha Srivastava, Wenjing Xue, Joel A. Indi, Sílvia Carbonell Sala, Julien Lagarde, M. Mar Albà, Eduardo Eyras
RATTLE reconstructs and quantifies transcripts from Nanopore sequencing without a reference genome, showing accuracy and scalability across simulated and experimental data.
Genome biology · Jul 8, 2022Peer-reviewedBioinformatics