Author

X.-B. Liu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:fungi (other)· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

N. Sahu· 3 shared A. Csernetics· 2 shared B. Balint· 2 shared B. Hegedus· 2 shared H. Wu· 2 shared L. G. Nagy· 2 shared M. Pareek· 2 shared M. Viragh· 2 shared

Activity by Year

2021-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersEvolutionary Biology

N. Sahu

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Taxonomic vs genomic fungi: contrasting evolutionary loss of protistan genomic heritage and emergence of fungal novelties

Z. Merenyi, K. Krizsan, N. Sahu, X.-B. Liu, B. Balint, J. Stajich, J. W. Spatafora, L. G. Nagy

This study analyzes gene family evolution across 123 fungal and related genomes to show gradual protist gene loss and episodic innovation in early fungal evolution.

bioRxiv · Nov 15, 2022 · PreprintEvolutionary Biology

Pre-assembled Cas9 ribonucleoprotein-mediated gene deletion identifies the carbon catabolite repressor and its target genes in Coprinopsis cinerea

M. Pareek, B. Hegedus, Z. Hou, A. Csernetics, H. Wu, M. Viragh, N. Sahu, X.-B. Liu, L. Nagy

The paper uses CRISPR-based gene deletion to study Cre1's role in carbon catabolite repression in Coprinopsis cinerea, revealing its regulation of plant biomass degradation genes.

bioRxiv · Jun 7, 2022 · PreprintMicrobiology

Lessons on fruiting body morphogenesis from genomes and transcriptomes of Agaricomycetes

L. G. Nagy, P. J. Vonk, M. Kunzler, C. Foldi, M. Viragh, R. A. Ohm, F. Hennicke, B. Balint, A. Csernetics, B. Hegedus, Z. Hou, X.-b. Liu, S. Nan, M. Pareek, N. Sahu, , Z. Merenyi

This paper identifies 921 conserved genes involved in fruiting body morphogenesis across Agaricomycetes fungi and proposes functional hypotheses for many of them.

bioRxiv · Dec 9, 2021Evolutionary Biology