Author

Xinguang Yang

Zhejiang University of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Assay:protein structure· 3 Research Focus:protein structure prediction· 3 Approach:deep learning· 2 Research Focus:benchmarking· 1 Approach:diffusion model· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Xinyue cuiiD· 3 shared Dongliang Hou· 2 shared Guijun ZhangiD· 2 shared Lingyu GeiD· 2 shared Xuhui Li· 2 shared Guijun Zhang· 1 shared Suhui WangiD· 1 shared Tengyu Xie· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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3 shared papersBioinformatics

Xinyue cuiORCID

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3 papers

Recent·Most cited

TopoFlow: Evolutionarily Conditioned Flow Matching for Protein Conformational Ensemble Generation

Xinguang Yang, Xinyue cui, Xuhui Li, Dongliang Hou, Suhui Wang, Tengyu Xie, Guijun Zhang

TopoFlow generates protein conformational ensembles using evolutionary and structural information, improving benchmark metrics and aligning with experimental data.

bioRxiv · Sep 24, 2026 · PreprintBioinformatics

Exploring protein conformational ensembles using evolutionary conditional diffusion

Xinyue Cui, Lingyu Ge, Xinguang Yang, Xuhui Li, Dongliang Hou, Xiaogen Zhou, Guijun Zhang

This paper introduces DiffEnsemble, a diffusion-based framework for modeling protein conformational ensembles, showing improved performance over existing methods.

Journal of Chemical Information and Modeling · Aug 27, 2026Peer-reviewedBioinformatics

M-DeepAssembly2: A Web Server for Predicting Multiple Conformations of Multi-domain Proteins Using Deep Learning

Xinyue Cui, Lingyu Ge, Xinguang Yang, Xu‐Hui Li, Guijun Zhang

M-DeepAssembly2 predicts multiple conformations of multi-domain proteins using deep learning, improving accuracy over previous methods.

bioRxiv · Oct 23, 2025 · PreprintBioinformatics