Author

Xingyuan Shi

Central South University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:perturbation response prediction· 1 Assay:scRNA-seq· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Min LiiD· 1 shared Ruiqing ZhengiD· 1 shared Tianrui WuiD· 1 shared Yanping Zeng· 1 shared Zhaoyu Fang· 1 shared Ziyang MiaoiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Min LiORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

GRAVITY: Dynamic gene regulatory network-enhanced RNA velocity modeling for trajectory inference and biological discovery

Ziyang Miao, Zhaoyu Fang, Xingyuan Shi, Yanping Zeng, Tianrui Wu, Ruiqing Zheng, Min Li

GRAVITY improves RNA velocity modeling by integrating gene regulatory networks, enabling accurate trajectory inference and discovery of terminal cell states in embryonic brain development.

bioRxiv · Feb 2, 2026 · PreprintBioinformatics