Ziyang Miao

GRAVITY improves RNA velocity modeling by integrating gene regulatory networks, enabling accurate trajectory inference and discovery of terminal cell states in embryonic brain development.

scLinguist translates between single-cell multi-omics modalities by pretraining on unimodal data and fine-tuning on paired data, outperforming existing methods in predicting protein abundance from RNA.

This paper introduces Tabula, a privacy-preserving foundation model for single-cell transcriptomics using federated learning and tabular modeling, achieving better performance with less data and revealing regulatory logic across biological systems.