BioLLM: A Standardized Framework for Integrating and Benchmarking Single-Cell Foundation Models
Ping Sun Qiu, Qianqian Chen, Hua Qin, Shuangsang Fang, Yilin Zhang, Yanlin Zhang, Tianyi Xia, Lei Cao, Yong Zhang, Xiaodong Fang, Yuxiang Li, Luni Hu
BioLLM integrates and benchmarks single-cell foundation models, revealing scGPTs' robust performance and highlighting limitations of scBERT in gene-level tasks.
Patterns · Jul 30, 2025Peer-reviewedBioinformatics