Author

Yaron Orenstein

Primary ORCID profile (0000-0002-3583-3112 · 17 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Yaron OrensteiniD17 papers · Bar-Ilan University

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:ChIP-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:protein structure prediction· 1 Assay:proteomics· 1

Frequent Co-Authors

Bonnie Berger· 1 shared Jadwiga Bienkoswka· 1 shared Raghavendra Hosur· 1 shared Ron Shamir· 1 shared Sean Simmons· 1 shared

Activity by Year

2015-2016 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Bonnie Berger

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2 papers

Recent·Most cited

Sequence biases in CLIP experimental data are incorporated in protein RNA-binding models

Yaron Orenstein, Raghavendra Hosur, Sean Simmons, Jadwiga Bienkoswka, Bonnie Berger

The paper identifies a bias in CLIP data caused by cleaving enzyme specificity, which affects protein RNA-binding models like GraphProt.

bioRxiv · Sep 14, 2016 · PreprintBioinformatics

HTS-IBIS: fast and accurate inference of binding site motifs from HT-SELEX data

Yaron Orenstein, Ron Shamir

HTS-IBIS improves motif inference from HT-SELEX data by correcting biases and selecting optimal parameters, outperforming existing methods in vitro and in vivo.

bioRxiv · Jul 8, 2015 · PreprintBioinformatics