Evaluation of Parallel Accumulation-Serial Fragmentation methods for metaproteomics using a model microbiome
Ruben Shreshta, Andrew T. Rajczewski, Aleksey Y. Ogurtsov, Katherine Do, Gelio Alves, Yi-Kuo Yu, Matthew Willets, Manuel Kleiner, Timothy J. Griffin, Pratik Dilip Jagtap
The paper presents a metaproteomic dataset to evaluate the performance of ddaPASEF and diaPASEF in terms of detection, coverage, and strain-level resolution.
bioRxiv · Aug 13, 2025 · PreprintBiochemistry