Author

Yifan Ren

University of Wisconsin–Madison

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Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Assay:imaging· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Emil Peter Thrane HertziD· 1 shared J Owen Andrews· 1 shared Juan C. CaicedoiD· 1 shared Louise Morlot· 1 shared Niels MailandiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 10 mutual co-author links

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1 shared paperBioinformatics

Emil Peter Thrane HertzORCID

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1 paper

Recent·Most cited

mnDINO: Accurate and robust segmentation of micronuclei with vision transformer networks

Yifan Ren, Louise Morlot, J Owen Andrews, Emil Peter Thrane Hertz, Niels Mailand, Juan C. Caicedo

mnDINO is a vision transformer model for accurate micronuclei segmentation in DNA-stained images, achieving high accuracy and generalization across cell lines and microscopes.

bioRxiv · Mar 12, 2026 · PreprintBioinformatics