Author

Yu Shen

Duke University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Research Focus:ecology & biodiversity· 1 Organism:human· 1 Assay:imaging· 1 Organism:plant (other)· 1

Frequent Co-Authors

Chaoyang Wu· 1 shared Chuan Shan XuiD· 1 shared Haoxin Tan· 1 shared Hongjun Yang· 1 shared Jielei ChuiD· 1 shared Josep PeñuelasiD· 1 shared Lei CheniD· 1 shared Philippe CiaisiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperEcology

Chaoyang Wu

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2 papers

Recent·Most cited

DeSCENT: Deconvolutional Single-Cell RNA-seq Enhances Transcriptome-based Cancer Survival Analysis

Yonghao Zhao, Zeyu You, Yu Shen, Jielei Chu, Xun Gong, Tianrui Li, Ziqiang Wang, Chuan Shan Xu, ZhiPeng Luo, Yazhou He

DeSCENT improves cancer survival analysis by integrating bulk RNA-seq deconvolution with single-cell RNA-seq data across multiple cancer cohorts.

bioRxiv · Mar 18, 2026 · PreprintBioinformatics

Asymmetric photosynthetic responses to hydrothermal variations between the two halves of the year in the Amazon rainforest

Yuchuan Yang, Yu Shen, Haoxin Tan, Hongjun Yang, Yongchang Ye, Zhanmang Liao, Chaoyang Wu, Josep Peñuelas, Philippe Ciais, Lei Chen

The paper examines asymmetric photosynthetic responses to hydrothermal variations between the first and second halves of the year in the Amazon rainforest, finding stronger precipitation limitations in the second half.

bioRxiv · Sep 3, 2025 · PreprintEcology