Author

Zeynep Cakmak

Columbia University Irving Medical Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexander J. StratigosiD· 1 shared Barbara Mankel· 1 shared Benjamin IzariD· 1 shared Christian M. SchürchiD· 1 shared Christopher SchroederiD· 1 shared Claus GarbeiD· 1 shared Eftychia ChatziioannouiD· 1 shared Evelyn Maczey· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Alexander J. StratigosORCID

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1 paper

Recent·Most cited

Genomic correlates of metastatic competence and progression in human melanoma

Eftychia Chatziioannou, Karan D. Luthria, Parin Shah, Sorin Armeanu–Ebinger, Jakob Admard, Christopher Schroeder, Stephan Forchhammer, Frederik Stihler, Xingpei Zhang, Synaida Maiche, Zeynep Cakmak, Barbara Mankel, Josua Stadelmaier, Teresa Amaral, Ulrike Leiter, , Martin Röcken

This study identifies genomic features, particularly copy-number alterations, that predict metastatic progression in melanoma and defines a six-gene signature associated with relapse.

bioRxiv · Sep 29, 2026 · PreprintGenomics