Tokenizing Foldable Protein Structures with Machine-Learned Artificial Amino-Acid Vocabulary
Xiaohan Lin, Zhen‐Yu Chen, Yanheng Li, Zicheng Ma, Chuanliu Fan, Ziqiang Cao, Shihao Feng, Yi Qin Gao, Jun Zhang
This paper introduces ProTokens, artificial amino-acid tokens that enable efficient compression and processing of protein structures for design and analysis.
bioRxiv · Nov 27, 2023 · PreprintBioinformatics