Zhen‐Yu Chen

LongPhase-TO reconstructs somatic haplotypes from tumor-only long-read sequencing, improving variant calling accuracy and haplotype block size.

This paper introduces ProTokens, artificial amino-acid tokens that enable efficient compression and processing of protein structures for design and analysis.

ColabDock improves protein-protein docking by integrating experimental restraints into a framework that outperforms existing methods in complex structure prediction.