Author

Ziting Zhang

Beijing National Research Center for Information Science and Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:transformer / foundation model· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Assay:protein sequence· 1 Assay:protein structure· 1

Frequent Co-Authors

Lei WeiiD· 2 shared Xiaowo WangiD· 2 shared Gaodeng Li· 1 shared Hai QiiD· 1 shared Jian ZhangiD· 1 shared Jianzhu MaiD· 1 shared Jiqing ZhengiD· 1 shared Junwei CheniD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersBioengineering

Lei WeiORCID

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Author profile →

2 papers

Recent·Most cited

Programming Biomolecular Interactions with All-Atom Generative Model

Xiangzhe Kong, Junwei Chen, Ziting Zhang, Gaodeng Li, Qingyuan Zhu, L Wei, Mingyu Li, Yan Shi, Weiyang Dai, Zishen Zhang, Wenjuan Tan, Rui Jiao, Xiaolun Wang, Jiqing Zheng, Ziyang Yu, , Jianzhu Ma

This paper introduces AnewOmni, a generative model that designs biomolecules across scales by learning interaction patterns and physical constraints from 5 million complexes.

bioRxiv · Jun 4, 2026 · PreprintBioengineering

Unified machine learning framework uncovers overlooked bias control in immunogenic neoantigen identification

Ziting Zhang, Wenxu Wu, Lei Wei, Hai Qi, Xiaowo Wang

This paper introduces a transformer-based framework for neoantigen identification, identifies a bias in immunogenicity prediction, and proposes a debiasing strategy to improve model fairness.

bioRxiv · Feb 7, 2024 · PreprintBioinformatics