Uyen Mai

The paper introduces MD-Cat, a method for phylogenetic dating using a categorical rate model, showing improved accuracy over existing methods on datasets with nonmodal or multimodal rate distributions.

This paper introduces LAML, a method for inferring time-scaled cell lineage trees from CRISPR-based lineage tracing data, showing improved accuracy over existing methods.

This paper introduces a method to improve phylogeny dating by minimizing the variance of log-transformed rate multipliers, showing better accuracy and robustness than existing methods.

TreeCluster uses phylogenetic trees to cluster biological sequences, improving consistency and downstream application effectiveness.