Author

Gernot Ernst

University of OsloORCID 0000-0001-5224-0338Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Andreas DominikiD· 2 shared Christopher SchölzeliD· 2 shared Valeria BlesiusiD· 2 shared Alexander GoesmanniD· 1 shared

Activity by Year

2021-2021 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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2 shared papersSystems Biology

Andreas DominikORCID

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2 papers

Recent·Most cited

Systems BiologyPLoS ONEPeer-reviewedJul 19, 2021

Countering reproducibility issues in mathematical models with software engineering techniques: A case study using a one-dimensional mathematical model of the atrioventricular node

Christopher Schölzel, Valeria Blesius, Gernot Ernst…·Andreas Dominik

This paper demonstrates how software engineering techniques improve reproducibility of a mathematical model of the atrioventricular node by implementing automated testing, version control, and modular design.

6 citations

statistical modelbenchmarking

𝕏 PostBluesky

Systems Biologynpj Systems Biology and ApplicationsPeer-reviewedJun 3, 2021

Characteristics of mathematical modeling languages that facilitate model reuse in systems biology: A software engineering perspective

Christopher Schölzel, Valeria Blesius, Gernot Ernst, Andreas Dominik

The paper identifies desirable characteristics for mathematical modeling languages in systems biology to improve model reuse and proposes guidelines for their implementation.

15 citations

statistical modelbenchmark study

𝕏 PostBluesky