Author

Xuming Xu

Yale UniversityORCID 0000-0001-5424-6709Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Mingfeng LiiD· 2 shared Akemi ShibataiD· 1 shared Amir KargeriD· 1 shared André M. M. SousaiD· 1 shared Andrew T.N. TebbenkampiD· 1 shared Annalisa PaolinoiD· 1 shared Bai Jiang· 1 shared Cai QiiD· 1 shared

Activity by Year

2016-2025 · peak 1/yr

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10 top collaborators · 31 mutual co-author links

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2 shared papersNeuroscience

Mingfeng LiORCID

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2 papers

Recent·Most cited

NeurosciencebioRxivPreprintMay 20, 2025

Adaptive Evolution of Gene Regulatory Networks in Mammalian Neocortical Neurons

Zhuo Li, Navjot Kaur, Gabriel Santpere…·Nenad Šestan

The paper identifies mammalian-specific gene regulatory elements and their role in neocortical neuron subtype diversity and connectivity, linking them to neurodevelopmental disorders.

1 citation

mousebulk RNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivApr 19, 2016

AC-PCA: simultaneous dimension reduction and adjustment for confounding variation

Zhixiang Lin, Can Yang, Ying Zhu…·Wing Hung Wong

AC-PCA reduces dimensionality and adjusts for confounding variation in biological datasets, recovering anatomical structure and shared variation across species.

DOI 10.1073/pnas.1617317113

humanmouse

𝕏 PostBluesky