Author

Anna Foix

European Bioinformatics InstituteORCID 0000-0001-5544-0538Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Assay:imaging· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Cédric Vincent-CuaziD· 1 shared Doaa M. TahaiD· 1 shared Elisa MessoriiD· 1 shared Lisa Mathilde FournieriD· 1 shared Pascal Frossard BiD· 1 shared Raphaëlle LuisieriD· 1 shared Rickie PataniiD· 1 shared Virginie UhlmanniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Cédric Vincent-CuazORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintJun 3, 2026

Topology-aware reconstruction of cellular state landscapes from microscopy using self-supervised learning

Elisa Messori, Doaa M. Taha, Lisa Mathilde Fournier…·Raphaëlle Luisier

The paper introduces SI-SimCLR, a self-supervised learning framework for reconstructing cellular phenotypic landscapes from microscopy data without segmentation or annotation, revealing substate organization and connections in astrocytes.

DOI 10.64898/2026.05.30.728966

humanimaging

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