Author

Lingxiao Li

Boston UniversityORCID 0000-0001-5571-5968Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Jiayuan DingiD· 2 shared Jiliang TangiD· 2 shared Qiaolin LuiD· 2 shared Yi ChangiD· 2 shared Dylan MolhoiD· 1 shared Hongzhi WeniD· 1 shared Julian VenegasiD· 1 shared Renming LiuiD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Jiayuan DingORCID

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2 papers

Recent·Most cited

BioinformaticsBriefings in BioinformaticsPeer-reviewedNov 22, 2024

Graph Contrastive Learning of Subcellular-resolution Spatial Transcriptomics Improves Cell Type Annotation and Reveals Critical Molecular Pathways

Qiaolin Lu, Jiayuan Ding, Lingxiao Li…·Xiaojie Qiu

Focus improves cell type annotation by modeling subcellular RNA distribution in spatial transcriptomics data and identifies cell type-specific molecular pathways.

5 citations

spatial transcriptomicscontrastive learning

𝕏 PostBluesky

BioinformaticsGenome biologyPeer-reviewedMar 19, 2024

DANCE: A Deep Learning Library and Benchmark Platform for Single-Cell Analysis

Jiayuan Ding, Renming Liu, Hongzhi Wen…·Jiliang Tang

DANCE provides a benchmark platform for single-cell analysis with 32 methods across 21 datasets, enabling easy reproduction and development of deep learning models.

15 citations

scRNA-seqdeep learning

𝕏 PostBluesky