Explainable deep neural networks for predicting sample phenotypes from single-cell transcriptomics
Jordi Martorell‐Marugán, Raúl López-Domínguez, Juan Antonio Villatoro-García…·Pedro Carmona‐Sáez
This paper introduces singleDeep, a deep learning pipeline for scRNA-Seq data analysis that improves phenotype prediction and provides insights into gene importance and cell types.