Author

Aurora Pozo

Universidade Federal do ParanáORCID 0000-0001-5808-3919Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:statistical model· 2 Assay:ChIP-seq· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Danilo Sipoli SanchesiD· 2 shared Jader M. Caldonazzo GarbeliniiD· 2 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

2 top collaborators · 1 mutual co-author link

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2 shared papersBioinformatics

Danilo Sipoli SanchesORCID

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2 papers

Recent·Most cited

BioinformaticsBMC BioinformaticsPeer-reviewedMar 26, 2024

biomapp::chip: Large-Scale Motif Analysis

Jader M. Caldonazzo Garbelini, Danilo Sipoli Sanches, Aurora Pozo

The paper introduces a tool for optimizing biological motif discovery in large datasets, showing improved performance and accuracy over existing methods in ChIP-seq analysis.

1 citation

ChIP-seqstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintApr 1, 2023

Discovering motifs and genomic patterns with SMT: a high-performance data structure for counting kmers

Jader M. Caldonazzo Garbelini, Danilo Sipoli Sanches, Aurora Pozo

The paper introduces SMT, a data structure for efficient kmer counting and motif discovery in genomic data, showing its effectiveness in handling noisy datasets and large-scale analysis.

DOI 10.1101/2023.04.01.535163

DNA methylationwhole-genome sequencing

𝕏 PostBluesky