PeptideForest: Semisupervised machine learning integrating multiple search engines for peptide identification
Tristan Ranff, Matthew Dennison, Jeroen Bédorf, Stefan Schulze, Nico Zinn, Marcus Bantscheff, J. J. R. M. van Heugten, Christian Fufezan
PeptideForest improves peptide identification by integrating multiple search engines and increases PSMs with q-value <1% without compromising quantification quality.
Journal of Proteome Research · Jan 22, 2025Peer-reviewedBioinformatics