Author

Katie L. Ovens

University of CalgaryORCID 0000-0001-5956-7739Unclaimed ORCID profile · follow to get notified of new preprints

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:large language model· 1 Approach:statistical model· 1

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Ebunoluwa MakindeiD· 1 shared Farhad MalekiiD· 1 shared

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Ebunoluwa MakindeORCID

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BioinformaticsbioRxivPreprintNov 23, 2025

A Multi-Agent Approach to Generating Context-Rich Gene Sets

Ebunoluwa Makinde, Farhad Maleki, Katie L. Ovens

This paper introduces a multi-agent system using large language models to enhance gene set databases by incorporating biological context from PubMed abstracts.

DOI 10.1101/2025.11.23.690073

humanbulk RNA-seq

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