Author

Osamu Ogasawara

National Institute of GeneticsORCID 0000-0001-6001-3397Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:dimensionality reduction· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Tazro OhtaiD· 2 shared Chikara MenoiD· 1 shared Go Shioi· 1 shared Hideki HatanakaiD· 1 shared Hideya KawajiiD· 1 shared Jun SeseiD· 1 shared Ryo Nakaki· 1 shared Shinya OkiiD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

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10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Tazro OhtaORCID

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2 papers

Recent·Most cited

BioinformaticsGigaSciencePeer-reviewedApr 1, 2019

Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection

Tazro Ohta, Tomoya Tanjo, Osamu Ogasawara

The paper develops CWL-metrics to analyze resource requirements of genomic workflows, enabling optimized cloud instance selection for cost and speed.

12 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky

GenomicsbioRxivPreprintApr 9, 2018

Integrative analysis of transcription factor occupancy at enhancers and disease risk loci in noncoding genomic regions

Shinya Oki, Tazro Ohta, Go Shioi…·Chikara Meno

The paper integrates public ChIP-seq and DNase-seq data to identify transcription factor interactions and their association with disease risk loci in noncoding regions.

16 citations

𝕏 PostBluesky