Author

Altana Namsaraeva

Helmholtz MunichORCID 0000-0001-6071-9410Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:cell type annotation· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Assay:imaging· 1 Approach:machine learning (classical)· 1 Research Focus:perturbation response prediction· 1 Assay:proteomics· 1

Frequent Co-Authors

Fabian Joachim TheisiD· 2 shared Lukas HeumosiD· 2 shared Alejandro Tejada-LapuertaiD· 1 shared Alessandro PalmaiD· 1 shared Ali Oğuz CaniD· 1 shared Amir Ali MoinfariD· 1 shared Antonia SchumacheriD· 1 shared Chris SanderiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

Fabian Joachim TheisORCID

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2 papers

Recent·Most cited

BioinformaticsNature MethodsPeer-reviewedDec 31, 2025

Pertpy: an end-to-end framework for perturbation analysis

Lukas Heumos, Yuge Ji, L T May…·Fabian Joachim Theis

Pertpy provides a modular framework for analyzing large-scale perturbation single-cell experiments, offering tools for metadata annotation and perturbation distance calculations.

74 citationstop 1%

scRNA-seqmachine learning (classical)

𝕏 PostBluesky

Systems BiologybioRxivPreprintSep 22, 2025

scPortrait integrates single-cell images into multimodal modeling

Sophia Clara Mädler, Niklas Arndt Schmacke, Alessandro Palma…·Matthias Mann

scPortrait integrates single-cell images with proteomics and transcriptomics data to identify cancer-associated macrophage subpopulations and embed images into transcriptome atlases.

1 citation

humanspatial transcriptomics

𝕏 PostBluesky