Author

Lilly May

Centre National de la Recherche ScientifiqueORCID 0009-0004-4337-2338Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:software / tool· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Assay:imaging· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1

Frequent Co-Authors

Alejandro Tejada-LapuertaiD· 1 shared Alexandre BlanciD· 1 shared Alice DauphiniD· 1 shared Altana NamsaraevaiD· 1 shared Amir Ali MoinfariD· 1 shared Antonia SchumacheriD· 1 shared Ben CocanougheriD· 1 shared Benjamin M.W. Jones· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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1 shared paperBioinformatics

Alejandro Tejada-LapuertaORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Pertpy: an end-to-end framework for perturbation analysis

Lukas Heumos, Yuge Ji, L T May, Tessa D. Green, Stefan Peidli, Xinyue Zhang, Xichen Wu, Johannes Ostner, Antonia Schumacher, Karin Hrovatin, Michaela Müller, Faye Chong, Gregor Sturm, Alejandro Tejada-Lapuerta, Emma Dann, , Fabian Joachim Theis

Pertpy provides a modular framework for analyzing large-scale perturbation single-cell experiments, offering tools for metadata annotation and perturbation distance calculations.

Nature Methods · Dec 31, 2025Peer-reviewedBioinformatics

Pre-training artificial neural networks with spontaneous retinal activity improves motion prediction in natural scenes

Lilly May, Alice Dauphin, Julijana Gjorgjieva

This study shows that pre-training neural networks with retinal waves improves motion prediction in natural scenes and accelerates learning.

PLoS Computational Biology · Mar 17, 2025Peer-reviewedNeuroscience

LarvaTagger: Manual and automatic tagging of Drosophila larval behaviour

François Laurent, Alexandre Blanc, Lilly May, Lautaro Gándara, Ben Cocanougher, Benjamin M.W. Jones, Peter Hague, Chloé Barré, Christian L. Vestergaard, Justin Crocker, Marta Zlatic, Tihana Jovanic, Jean‐Baptiste Masson

LarvaTagger combines a pre-trained deep neural network with a GUI for manual tagging and training new automatic taggers using updated ground truth.

Bioinformatics · Jul 1, 2024Peer-reviewedBioinformatics