Author

Xingyu Yang

Georgia Institute of TechnologyORCID 0000-0001-6145-4522Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Assay:CITE-seq· 1 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Assay:imaging· 1

Frequent Co-Authors

Peng QiuiD· 2 shared Anastasia ZhurikhinaiD· 1 shared Christopher M. TiptoniD· 1 shared Denis TsygankoviD· 1 shared Enlu Zhou· 1 shared Frances Eun-Hyung LeeiD· 1 shared Iñaki Sanz· 1 shared Matthew Charles WoodruffiD· 1 shared

Activity by Year

2020-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBioinformatics

Peng QiuORCID

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2 papers

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedSep 3, 2020

Shape-to-graph Mapping Method for Efficient Characterization and Classification of Complex Geometries in Biological Images

William Pilcher, Xingyu Yang, Anastasia Zhurikhina…·Denis Tsygankov

The paper introduces a shape-to-graph mapping method for quantifying and classifying complex geometries in biological images using graph-based metrics and machine learning.

1 citation

humanimaging

𝕏 PostBluesky

BioinformaticsBMC GenomicsPeer-reviewedSep 1, 2020

GLaMST: Grow Lineages along Minimum Spanning Tree for B Cell Receptor Sequencing Data

Xingyu Yang, Christopher M. Tipton, Matthew Charles Woodruff…·Peng Qiu

GLaMST reconstructs lineage trees from BCR sequencing data by interpolating unobserved sequences using a minimum spanning tree, outperforming existing methods in simulations with high mutation rates.

15 citations

CITE-seqstatistical model

𝕏 PostBluesky