Author

Prarthana Gowda

Rutgers, The State University of New JerseyORCID 0000-0001-6293-6400Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Ada McCarrolliD· 2 shared Alan R. SandersiD· 2 shared Carlos N. PatoiD· 2 shared David SirkiniD· 2 shared Hanwen ZhangiD· 2 shared Jennifer Gladys MulleiD· 2 shared Jubao DuaniD· 2 shared Lilia PeytoniD· 2 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Ada McCarrollORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintMar 1, 2026

Female iPSC X-chromosome inactivation (XCI) erosion and its transcriptomic effects during CRISPR gene editing and neural differentiation

Christina Thapa, Emily Oh, David Sirkin…·Jubao Duan

The paper investigates XCI erosion in CRISPR-edited female iPSCs and their derived neurons, showing variable erosion in iPSCs and preserved XIST effects on gene expression in neurons.

1 citation

humanbulk RNA-seq

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GeneticsStem Cell ReportsPeer-reviewedSep 12, 2024

Scaled and Efficient Derivation of Loss of Function Alleles in Risk Genes for Neurodevelopmental and Psychiatric Disorders in Human iPSC

Hanwen Zhang, Ada McCarroll, Lilia Peyton…·Jubao Duan

The paper develops a pipeline for efficient loss-of-function mutagenesis in NPD genes using base editing in hiPSCs, achieving high reproducibility and confirming neural phenotypes.

16 citations

humanbulk RNA-seq

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