Author

Jean‐Stéphane Varré

Centre National de la Recherche ScientifiqueORCID 0000-0001-6322-0519Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Hélène TouzetiD· 1 shared Lilian MarchandiD· 1 shared Pierre MarijoniD· 1 shared Rayan ChikhiiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 2 mutual co-author links

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1 shared paperBioinformatics

Hélène TouzetORCID

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2 papers

Recent·Most cited

RNA-tailor: accurate gene-level identification of transcript isoform diversity from long reads

Lilian Marchand, Hélène Touzet, Jean‐Stéphane Varré

RNA-tailor identifies transcript isoform diversity at the gene level with high accuracy using long-read sequencing data.

bioRxiv · Sep 9, 2025 · PreprintBioinformatics

yacrd and fpa: upstream tools for long-read genome assembly

Pierre Marijon, Rayan Chikhi, Jean‐Stéphane Varré

The paper introduces two tools, yacrd and fpa, to improve long-read genome assembly by removing chimeric reads and filtering spurious overlaps, resulting in higher-quality assemblies and faster processing.

Bioinformatics · Apr 15, 2020Peer-reviewedBioinformatics