Experience of application of AlphaFold 3 technology and molecular docking in studying the Rieske dioxygenase system of Achromobacteria
Sergei Yu. Shchyogolev, Yelena V. Kryuchkova, A. Yu. Muratova, Olga Viktorovna Turkovskaya, L. Yu. Matora
The paper uses AlphaFold 3 and DeepPeptide to identify propeptides in Rieske dioxygenase system proteins of Achromobacteria, and characterizes their 3D structures and substrate interactions.
bioRxiv · Jul 18, 2025 · PreprintMicrobiology