Author

Francisnei Pedrosa‐Silva

State University of Norte FluminenseORCID 0000-0001-6394-7590Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Plant Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Organism:bacteria (other)· 3 Research Focus:gene regulatory network inference· 3 Research Focus:variant calling· 3 Assay:whole-genome sequencing· 3 Organism:plant (other)· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Thiago M. VenâncioiD· 5 shared Fábio Lopes OlivaresiD· 2 shared Hemanoel Passarelli‐AraujoiD· 2 shared Beatriz Elisa Barcelos CyríacoiD· 1 shared Fabricio Almeida‐SilvaiD· 1 shared Felipe F. Rimes-Casais· 1 shared Filipe Pereira MatteoliiD· 1 shared Jussara Kasuko PalmeiroiD· 1 shared

Activity by Year

2019-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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5 shared papersPlant Biology

Thiago M. VenâncioORCID

Mutual co-authors in cluster

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5 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 1, 2025

Genomic insights into the genus Pantoea: biotechnological potential and lifestyle diversity

Felipe F. Rimes-Casais, Francisnei Pedrosa‐Silva, Thiago M. Venâncio

This study analyzes Pantoea genomes to identify genes linked to biotechnological potential, virulence, and antibiotic resistance, clarifying lifestyle strategies within the genus.

DOI 10.1101/2025.10.01.679771

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

Plant BiologyPhysiologia PlantarumPeer-reviewedNov 1, 2024

Cannabis Expression Atlas: a comprehensive resource for integrative analysis of Cannabis sativa L. gene expression

Kevelin Barbosa‐Xavier, Francisnei Pedrosa‐Silva, Fabricio Almeida‐Silva, Thiago M. Venâncio

The paper compiles and analyzes Cannabis RNA-Seq data to create a database for gene expression studies in Cannabis sativa L.

11 citations

plant (other)bulk RNA-seq

𝕏 PostBluesky

Plant BiologySeedsPeer-reviewedSep 26, 2024

Comparative metagenomic profiling of seed-borne microbiomes in a landrace and a hybrid maize variety

Sarah Henaut-Jacobs, Beatriz Elisa Barcelos Cyríaco, Francisnei Pedrosa‐Silva…·Thiago M. Venâncio

This study compares seed-borne microbiomes of a landrace and hybrid maize variety, finding greater diversity in the landrace and distinct functional gene profiles.

5 citations

plant (other)metagenomics

𝕏 PostBluesky

GenomicsFEBS JournalPeer-reviewedJul 18, 2019

Genomic analysis unveils important aspects of population structure, virulence, and antimicrobial resistance in Klebsiella aerogenes

Hemanoel Passarelli‐Araujo, Jussara Kasuko Palmeiro, Kanhu C. Moharana…·Thiago M. Venâncio

This study analyzes the population structure, virulence, and antimicrobial resistance of Klebsiella aerogenes using genomic data from 97 isolates.

38 citations

bacteria (other)whole-genome sequencing

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GenomicsGenomicsPeer-reviewedJul 4, 2019

Population structure and pangenome analysis of Enterobacter bugandensis uncover the presence of blaCTX-M-55, blaNDM-5 and blaIMI-1, along with sophisticated iron acquisition strategies

Filipe Pereira Matteoli, Hemanoel Passarelli‐Araujo, Francisnei Pedrosa‐Silva…·Thiago M. Venâncio

The paper analyzes the pangenome and population structure of Enterobacter bugandensis, identifying antimicrobial resistance genes and iron acquisition strategies across different phylogroups.

27 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky