Author

Srinivas Akula

Swedish University of Agricultural SciencesORCID 0000-0001-6628-1640Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Assay:scRNA-seq· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Amanda RaineiD· 2 shared Jessica NordlundiD· 2 shared Kim FegraeusiD· 2 shared Miia RiihimäkiiD· 2 shared Sara WernerssoniD· 2 shared Ida WaerniD· 1 shared Lars HellmaniD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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2 shared papersGenomics

Amanda RaineORCID

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2 papers

Recent·Most cited

GenomicsPLoS ONEPeer-reviewedJan 24, 2025

Exploring a pico-well based scRNA-seq method (HIVE) for simplified processing of equine bronchoalveolar lavage cells

Kim Fegraeus, Miia Riihimäki, Jessica Nordlund…·Amanda Raine

This study evaluates the HIVE scRNA-seq method for processing equine BAL cells, finding it identifies major cell types but underrepresents T cells and overrepresents macrophages, with potential for improvement.

2 citations

humanscRNA-seq

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GenomicsScientific ReportsPeer-reviewedSep 27, 2023

Single cell transcriptomics delineates the immune-cell landscape in equine lower airways and reveals upregulation of the FKBP5 gene in horses with asthma

Miia Riihimäki, Kim Fegraeus, Jessica Nordlund…·Amanda Raine

The paper uses scRNA-seq to analyze immune cell populations in equine BAL fluid from horses with asthma and healthy controls, identifying FKBP5 as upregulated in asthma cases.

17 citations

scRNA-seqstatistical model

𝕏 PostBluesky