Author

Sofie Vande Casteele

Ghent UniversityORCID 0000-0001-6681-1146Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:metabolomics· 1 Assay:proteomics· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Bart Van PuyveldeiD· 2 shared Dieter L. D. DeforceiD· 2 shared Laura De ClerckiD· 2 shared Maarten DhaenensiD· 2 shared Sander WillemsiD· 2 shared Simon DalediD· 2 shared An StaesiD· 1 shared Filip Van NieuwerburghiD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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2 shared papersBioinformatics

Bart Van PuyveldeORCID

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2 papers

Recent·Most cited

BioinformaticsPROTEOMICSPeer-reviewedJan 25, 2020

Removing the hidden data dependency of DIA with predicted spectral libraries

Bart Van Puyvelde, Sander Willems, Ralf Gabriels…·Maarten Dhaenens

The paper removes the dependency on DDA libraries in DIA by using predicted spectral libraries, making the workflow deterministic and improving standardization in clinical proteomics.

46 citations

proteomicsstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 24, 2019

Ion-networks: a sparse data format capturing full data integrity of data independent acquisition mass spectrometry

Sander Willems, Simon Daled, Bart Van Puyvelde…·Maarten Dhaenens

The paper introduces ion-networks, a data format for DIA MS that captures full data integrity by representing reproducible fragment ions and their consistent co-elution across runs.

2 citations

metabolomics

𝕏 PostBluesky