Author

Shu Liu

The University of TokyoORCID 0000-0001-6907-8787Unclaimed ORCID profile · follow to get notified of new preprints

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Shu Liu1 paper · University of Kentucky

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1

Frequent Co-Authors

Bowen LiuiD· 1 shared Fujio ToriumiiD· 1 shared Kang XuiD· 1 shared Kenta NakaiiD· 1 shared Weihang ZhangiD· 1 shared Xin ZengiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Bowen LiuORCID

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1 paper

Recent·Most cited

Gene2role: a role-based gene embedding method for comparative analysis of signed gene regulatory networks

Xin Zeng, Shu Liu, Bowen Liu, Weihang Zhang, Kang Xu, Fujio Toriumi, Kenta Nakai

Gene2role embeds genes using multi-hop topological information from signed GRNs to identify topological changes across cell types and quantify module stability.

BMC Bioinformatics · May 24, 2025Peer-reviewedBioinformatics