Author

Junfeng Shi

China University of GeosciencesORCID 0000-0001-7176-572XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:multiome· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Dan MengiD· 1 shared Dylan J. TayloriD· 1 shared Evan E. EichleriD· 1 shared Glennis A. LogsdoniD· 1 shared Guohua DongiD· 1 shared Jiahao ZhouiD· 1 shared Jiaxin ZhaoiD· 1 shared Jing WangiD· 1 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Dan MengORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintDec 17, 2022

A refined characterization of large-scale genomic differences in the first complete human genome

Xiangyu Yang, Xuankai Wang, Yawen Zou…·Yafei Mao

The paper identifies and categorizes large-scale genomic differences between the T2T-CHM13 and GRCh38 human genome assemblies, highlighting their implications for disease and evolution.

2 citations

humanwhole-genome sequencing

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BioinformaticsbioRxivPreprintDec 13, 2022

MIDAS: a deep generative model for mosaic integration and knowledge transfer of single-cell multimodal data

Zhen He, Yaowen Chen, Shuofeng Hu…·Xiaomin Ying

MIDAS integrates and transfers knowledge from single-cell multimodal data by addressing modality alignment and batch effects through a deep probabilistic framework.

1 citation

humanscRNA-seq

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