Author

Collin V. Brummel

Michigan MedicineORCID 0000-0001-7198-8560Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:whole-genome sequencing· 2 Research Focus:differential expression· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

John Chad BrenneriD· 2 shared Wenjin GuiD· 2 shared Ahmed M. ElhossinyiD· 1 shared Alan P. BoyleiD· 1 shared Andrew G. ShumaniD· 1 shared Apurva D. BhangaleiD· 1 shared Apurva Dhanesh Bhangale· 1 shared Chaz L. StuckeniD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

John Chad BrennerORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 10, 2026

Spatiotemporal Heterogeneity of HPV Integration Architectures Drive Oncogenic Features of Oropharyngeal Cancer

Wenjin Gu, Apurva Dhanesh Bhangale, Xiaomeng Du…·John Chad Brenner

The paper characterizes HPV integration structures in oropharyngeal cancer and links Type2 integration to oncogenic features and aggressive tumor behavior.

DOI 10.64898/2026.10.03.756294

humanwhole-genome sequencing

𝕏 PostBluesky

BioinformaticsCancerPeer-reviewedJun 23, 2021

SearcHPV: a novel approach to identify and assemble human papillomavirus-host genomic integration events in cancer

Lisa M. Pinatti, Wenjin Gu, Yifan Wang…·John Chad Brenner

SearcHPV identifies and assembles HPV-host integration sites in cancer with higher sensitivity and specificity than existing methods.

19 citations

humanwhole-genome sequencing

𝕏 PostBluesky