Author

Andrey V. Timofeev

AI Center for SCO+ Countries LLCORCID 0000-0001-7212-5230Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:ATAC-seq· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1 Organism:human· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Alexander AnufrieviD· 2 shared Alexander BratishchikoviD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

2 top collaborators · 1 mutual co-author link

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2 shared papersBioinformatics

Alexander AnufrievORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintNov 3, 2026

Continuous Topological Accessibility (RFA) as a 3D-Aware GRN Filter: Anticorrelation with eQTL and No Prediction of ΔRNA

Timofeev Andrey, Alexander Bratishchikov, Alexander Anufriev

This paper introduces RFA, a 3D-aware GRN filter, and finds it anticorrelates with eQTL via local distance-decay but does not predict ΔRNA.

DOI 10.64898/2026.11.02.763620

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 28, 2026

Ordered Gromov-Hausdorff Metric: A New Tool for Comparative Analysis of Protein Structures

Andrey V. Timofeev, Alexander Anufriev

This paper introduces the Ordered Gromov-Hausdorff (OGH) metric to compare protein structures by incorporating residue order, showing it outperforms TM-score in detecting homologous proteins.

DOI 10.64898/2026.05.23.727377

protein structurestatistical model

𝕏 PostBluesky