Author

Alexander J. Solivais

University of Wisconsin–MadisonORCID 0000-0001-7282-8809Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Organism:human· 1 Assay:proteomics· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1 Organism:yeast· 1

Frequent Co-Authors

Hannah Boekweg· 1 shared Lloyd M. SmithiD· 1 shared Michael R. ShortreediD· 1 shared Samuel PayneiD· 1 shared Uri KeichiD· 1 shared William Stafford NobleiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Hannah Boekweg

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1 paper

Recent·Most cited

Improved detection of differentially abundant proteins through FDR-control of peptide-identity-propagation

Alexander J. Solivais, Hannah Boekweg, Lloyd M. Smith, William Stafford Noble, Michael R. Shortreed, Samuel Payne, Uri Keich

The paper introduces PIP-ECHO, a method to control false discovery rate in peptide-identity-propagation, showing it outperforms existing tools in FDR control and differential protein abundance detection.

Journal of Proteome Research · Jul 30, 2025Peer-reviewedBioinformatics