A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria.
Erki Aun, Age Brauer, Veljo Kisand, Tanel Tenson, Maido Remm
PhenotypeSeeker predicts bacterial phenotypes from genomic sequences with high accuracy using k-mer-based models, achieving fast inference on assembled genomes.
PLoS Computational Biology · Oct 22, 2018Peer-reviewedBioinformatics