Author

Vincent Prost

Centre National de la Recherche ScientifiqueORCID 0000-0001-7986-3156Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:gene regulatory network inference· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Stéphane Gazut· 2 shared Thomas BrülsiD· 2 shared Bruno Farcy· 1 shared Olexiy Kyrgyzov· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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2 shared papersBioinformatics

Stéphane Gazut

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2 papers

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedJun 18, 2021

A zero inflated log-normal model for inference of sparse microbial association networks

Vincent Prost, Stéphane Gazut, Thomas Brüls

This paper introduces a zero-inflated log-normal graphical model for microbial association network inference, showing improved performance on sparse metagenomic data.

23 citations

metagenomicsstatistical model

𝕏 PostBluesky

BioinformaticsGigaSciencePeer-reviewedMar 27, 2020

Binning unassembled short reads based on k-mer covariance using sparse coding

Olexiy Kyrgyzov, Vincent Prost, Stéphane Gazut…·Thomas Brüls

This paper introduces a scalable pre-assembly binning method using sparse coding to recover metagenome-assembled genomes from short reads, showing it can recover low-abundance genomes effectively.

9 citations

metagenomicsstatistical model

𝕏 PostBluesky