Author

Sophia T. McDuffee

University of FloridaORCID 0000-0001-8137-0756Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:differential expression· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Aastha SubediiD· 1 shared Amandeep KauriD· 1 shared Anuj SharmaiD· 1 shared Apekshya ParajuliiD· 1 shared Erica M. GossiD· 1 shared Fernanda Iruegas-BocardoiD· 1 shared Gary Edward ValladiD· 1 shared Gerald V. Minsavage· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Aastha SubediORCID

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1 paper

Recent·Most cited

GenomicsbioRxivPreprintAug 9, 2026

Allelic Diversity and Core Conservation of Type III Effectors Across Xanthomonads Causing Bacterial Spot of Pepper and Tomato

Apekshya Parajuli, Aastha Subedi, Amandeep Kaur…·Jeffrey B. Jones

The paper characterizes type III effector diversity and conservation across Xanthomonas pathogens causing bacterial spot of pepper and tomato, revealing core effectors and population-specific variation.

DOI 10.64898/2026.08.04.742720

bacteria (other)whole-genome sequencing

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