Author

Aastha Subedi

University of FloridaORCID 0000-0002-1519-2194Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 3 Assay:whole-genome sequencing· 3 Research Focus:chromatin & epigenetic regulation· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Erica M. GossiD· 3 shared Jeffrey B. JonesiD· 3 shared Amandeep KauriD· 2 shared Anuj SharmaiD· 2 shared Fernanda Iruegas-BocardoiD· 2 shared Gary Edward ValladiD· 2 shared Gerald V. Minsavage· 2 shared Jeannie M. Klein-GordoniD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Erica M. GossORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintAug 9, 2026

Allelic Diversity and Core Conservation of Type III Effectors Across Xanthomonads Causing Bacterial Spot of Pepper and Tomato

Apekshya Parajuli, Aastha Subedi, Amandeep Kaur…·Jeffrey B. Jones

The paper characterizes type III effector diversity and conservation across Xanthomonas pathogens causing bacterial spot of pepper and tomato, revealing core effectors and population-specific variation.

DOI 10.64898/2026.08.04.742720

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

Plant BiologyPlant DiseasePeer-reviewedAug 20, 2025

Rapid population flux in bacterial spot xanthomonads during a transition in dominance between two genotypes in consecutive tomato production seasons and identification of a new species Xanthomonas oklahomensis sp. nov.

Brett Johnson, Aastha Subedi, J. P. Damicone…·Mustafa O. Jibrin

The paper tracks population shifts between Xanthomonas species during tomato bacterial spot outbreaks and identifies a new species, Xanthomonas oklahomensis.

2 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

MicrobiologyPLoS PathogensPeer-reviewedApr 9, 2025

Diversification of an emerging bacterial plant pathogen; insights from the global spread of Xanthomonas euvesicatoria pv. perforans

Sujan Timilsina, Fernanda Iruegas-Bocardo, Mustafa O. Jibrin…·Erica M. Goss

This study analyzes the global genetic diversity and evolution of Xanthomonas euvesicatoria pv. perforans, revealing population structure and effector gene variation linked to its spread as a tomato pathogen.

12 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky