Ananth Hari

Qombucha infers unobserved progenitor methylation profiles in GBM, revealing subtype-specific developmental programs and improved subtype classification.

Geny improves KIR gene genotyping accuracy by combining expectation-maximization and integer linear programming to resolve ambiguities in sequencing data.

BAKIR improves KIR gene annotation accuracy by using a biologically-informed pipeline on phased genome assemblies, enhancing variant calling and allele identification.

Aldy 4 is a pharmacogenomics genotyper and star-allele caller that improves accuracy across sequencing technologies through combinatorial optimization and novel models.

ImmunoTyper-SR genotypes IGHV alleles from short read data and identifies associations between IGHV alleles and anti-type I IFN autoantibodies in COVID-19 patients.