Author

Asli Sahin

École Polytechnique Fédérale de LausanneORCID 0000-0001-8408-4026Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1

Frequent Co-Authors

Vassily Hatzimanikatis AiD· 2 shared Daniel WeilandtiD· 1 shared Evangelia VayenaiD· 1 shared Omid OftadehiD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

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2 shared papersSystems Biology

Vassily Hatzimanikatis AORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintJan 30, 2024

A constraint-based framework to reconstruct interaction networks in microbial communities

Omid Oftadeh, Asli Sahin, Evangelia Vayena, Vassily Hatzimanikatis A

The paper introduces ReMIND, a framework to reconstruct microbial community interaction networks based on metabolic capabilities, applied to uranium-reducing communities and honeybee gut microbiomes.

5 citations

metagenomicsstatistical model

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Systems BiologybioRxivPreprintApr 12, 2022

Optimal enzyme utilization suggests concentrations and thermodynamics favor condition-specific saturations and binding mechanisms

Asli Sahin, Daniel Weilandt, Vassily Hatzimanikatis A

The paper develops a framework to analyze optimal enzyme operation modes under varying conditions, showing that enzyme efficiency depends on reactant concentrations and mechanism type.

DOI 10.1101/2022.04.12.488028

statistical model

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