Author

Steven R. Ahrendt

Lawrence Berkeley National LaboratoryORCID 0000-0001-8492-4830Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Genomics· 4

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 4 Assay:whole-genome sequencing· 4 Research Focus:gene regulatory network inference· 3 Approach:experimental assay· 2 Research Focus:phylogenetics / evolution· 2 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Anna LipzeniD· 3 shared Bernard HenrissatiD· 3 shared Élodie DrulaiD· 3 shared Igor V. GrigorieviD· 3 shared Jasmyn L. PangilinaniD· 3 shared Kurt M. LaButtiiD· 3 shared Alan KuoiD· 2 shared Bill Andreopoulos· 2 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersGenomics

Anna LipzenORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

GenomicsMycologiaPeer-reviewedJul 26, 2023

Genomes and transcriptomes help unravel the complex life cycle of the blastoclad fungus, Coelomomyces lativittatus, an obligate parasite of mosquitoes and microcrustaceans

Cassandra L. Ettinger, Talieh Ostovar, Mark N. Yacoub…·Jason Stajich

The paper generates draft genomes and transcriptomes for Coelomomyces lativittatus, analyzing gene expression across life stages to understand its biology and life cycle.

8 citations

whole-genome sequencingbulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintNov 10, 2022

Genomic innovation and horizontal gene transfer shaped plant colonization and biomass degradation strategies of a globally prevalent fungal pathogen

Neha Sahu, Boris Inđić, Johanna W.‐H. Wong‐Bajracharya…·László G. Nagy

This study identifies horizontal gene transfer events in Armillaria fungi that contribute to plant biomass degradation and pathogenicity.

5 citations

fungi (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsNew PhytologistPeer-reviewedNov 19, 2021

Secondary metabolism drives ecological breadth in the Xylariaceae

Mario Emilio Ernesto Franco, Jennifer H. Wisecaver, A. Elizabeth Arnold…·Jana M. U’Ren

The paper shows that secondary metabolism gene clusters in Xylariales fungi are linked to broader ecological roles and increased gene diversity.

71 citationstop 2%

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsNew PhytologistPeer-reviewedNov 12, 2021

Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales

Gang Wu, Shingo Miyauchi, Emmanuelle Morin…·Francis M Martin

This study identifies genomic traits of ectomycorrhizal transitions in Boletales by comparing gene repertoires and reconstructing gene duplication/loss histories.

55 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky