Author

Henrik Mannerström

Aalto UniversityORCID 0000-0001-8492-665XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Harri J LähdesmäkiiD· 2 shared Brigitta StockingeriD· 1 shared Helena AhlforsiD· 1 shared Jukka IntosalmiiD· 1 shared Michele VantiniiD· 1 shared Saara Hiltunen· 1 shared Sini RautioiD· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 13 mutual co-author links

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2 shared papersBioinformatics

Harri J LähdesmäkiORCID

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2 papers

Recent·Most cited

BioinformaticsComputers in Biology and MedicinePeer-reviewedJan 25, 2022

PairGP: Gaussian process modeling of longitudinal data from paired multi-condition studies

Michele Vantini, Henrik Mannerström, Sini Rautio…·Harri J Lähdesmäki

PairGP models longitudinal gene expression data from paired multi-condition studies to identify condition groups with different dynamics.

5 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMay 31, 2018

SCHiRM: Single Cell Hierarchical Regression Model to detect dependencies in read count data

Jukka Intosalmi, Henrik Mannerström, Saara Hiltunen, Harri J Lähdesmäki

SCHiRM detects gene dependencies in scRNA-seq data using a hierarchical regression model, outperforming standard techniques in parameter inference and variable selection.

8 citations

scRNA-seqstatistical model

𝕏 PostBluesky